BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020E11LP1|AL427635
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig959 1442 0.0
>3x_Contig959
Length = 3065
Score = 1442 bits (712), Expect = 0.0
Identities = 811/855 (94%), Gaps = 7/855 (0%)
Strand = Plus / Plus
Query: 1 tgtgtdaacgattgggccactccagttggcccaggcgttaccgcagcctataccaccaac 60
||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 928 tgtgtgaccgattgggccactccagttggcccaggcgttaccgcagcctt--ccaccaac 985
Query: 61 atttactttcattcagattcgatatgagattggacggtgataagaacaccgttgtgtacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 atttactttcattcagattcgatatgagattggacggtgataagaacaccgttgtgtacg 1045
Query: 121 atgactacttgccaatggaagagaacacagctctaaatccatataacattaggtghaham 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 1046 atgactacttgccaatggaagagaacacagctctaaatccatataacatt-ggtgc-cac 1103
Query: 181 tmaaaagagaacttttgttgaaaaatcgggttccatcgatcaatctccattcactaatag 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 tcaaaagagaacttttgttgaaaaatcgggttccatcgatcaatctccattcactaatag 1163
Query: 241 aacatataaggtgattaacgaaaamtcaatcaacccggtaactaagaagccagacggata 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||
Sbjct: 1164 aacatataaggtgattaacgaaaactcaatcaacccggtaactaagaagccagtcggtta 1223
Query: 301 maagtwcraaatgcmagctaaacaaatgatcwtggcttctaaggattcatacaacgttaa 360
|||| | |||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1224 caagttcgaaatgccagctaaacaaatgatcttggcttctaaggattcatacaacgttaa 1283
Query: 361 gagagmtmacttmgmaaataaaaaaaatwaggtcaccaagtacagcagaagacagaatgw 420
||||| | |||| | || |||| ||| | ||||||||||||| |||||||||||||||
Sbjct: 1284 gagagctcacttcgcaactaaacaaatttgggtcaccaagtac-gcagaagacagaatgt 1342
Query: 421 atgmagcwggtgaattcacwaaccagtcgaccgaagacaccggtctaaaggtttgggcag 480
||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1343 atgcagctggtgaattcactaaccagtcgaccgaagacaccggtctaaaggtttgggcag 1402
Query: 481 awgggwctgaaagcagttagaaacacaramatcgtagtttgagccaactttggctctaac 540
| ||| |||||||| |||||||||||| | ||||| ||||| ||||||||||||||||||
Sbjct: 1403 atgggtctgaaagc-gttagaaacacagacatcgttgtttg-gccaactttggctctaac 1460
Query: 541 acatcctccggtcactgaacaattcccagtgatgacatctgatttcttgcaattcttgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1461 acatcctccggtcactgaacaattcccagtgatgacatctgatttcttgcaattcttgat 1520
Query: 601 cactccagcttcgttcttcgaccgtaacccagctctagatgtcccacttgcaaacaacaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1521 cactccagcttcgttcttcgaccgtaacccagctctagatgtcccacttgcaaacaacaa 1580
Query: 661 cttcaacaagtctgtatattatgargatgctaacaaggcggacggcaagccatcgtccga 720
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1581 cttcaacaagtctgtatattatgaagatgctaacaaggcggacggcaagccatcgtccga 1640
Query: 721 gtgttgtaagatgtagaagtggttgataaaactaaatattaawtwttccctgtgtaagca 780
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1641 gtgttgtaagatgtagaagtggttgataaaactaaatattaaatattccctgtgtaagca 1700
Query: 781 attattgaaaaactatgaaatgagcaactactaaagrtccatcaaatgagcaataattac 840
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1701 attattgaaaaactatgaaatgagcaactactaaagatccatcaaatgagcaataattac 1760
Query: 841 tgtaacgcacttccc 855
|||||||||||||||
Sbjct: 1761 tgtaacgcacttccc 1775
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4836
Number of Sequences: 1807
Number of extensions: 4836
Number of successful extensions: 108
Number of sequences better than 1.0e-20: 1
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)